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Zymography Jeff Wilkesman

Zymography By Jeff Wilkesman

Zymography by Jeff Wilkesman


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Summary

This detailed volume examines the latest techniques and protocols associated with zymography, the practice of detecting enzyme activity on electrophoretic gels. Sections cover subjects such as endopeptidase zymography, reverse zymography & in situ zymography, 2D zymography, as well as a variety of special cases.

Zymography Summary

Zymography: Methods and Protocols by Jeff Wilkesman

This detailed volume examines the latest techniques and protocols associated with zymography, the practice of detecting enzyme activity on electrophoretic gels. Sections cover subjects such as endopeptidase zymography, reverse zymography & in situ zymography, 2D zymography, as well as a variety of special cases. Written in the highly respected Methods in Molecular Biology series format, chapters include brief introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.
Comprehensive and practical, Zymography: Methods and Protocols serves as an ideal aid for a broad array of researchers from the fields of biological and medicinal science, as well as scientists working in clinical and diagnostic medicine, medical genetics, agricultural entomology, genetic monitoring of environmental pollution, and forensic science.

Table of Contents

Part I: Introduction

1. Zymography Principles

Jeff Wilkesman and Liliana Kurz

Part II: Endopeptidase Zymography

2. Serine Protease Zymography: Low-Cost, Rapid, and Highly Sensitive RAMA Casein Zymography

Hidetaro Yasumitsu

3. Cysteine Protease Zymography: Brief Review

Jeff Wilkesman

4. Aspartic Protease Zymography Case Study: Detection of Fungal Acid Proteases by Zymography

Gavin Kernaghan and Michael Mayerhofer

5. Detection of Aspartic Proteinase Activities Using Gel Zymography

Handunge Kumudu Irani Perera

6. MMP Activity Detection in Zymograms

Peter Bencsik, Monika Bartekova, Aniko Goerbe, Krisztina Kiss, Janos Paloczi, Jana Radosinska, Gergo Szucs, and Peter Ferdinandy

7. Characterization of Novel Collagenolytic Proteases

Goran Mucic, Brankica Raskovic, and Natalija Polovic

8. Zymography as a Research Tool in the Study of Matrix Metalloproteinase Inhibitors

Zongli Ren, Juanjuan Chen, and Raouf A. Khalil

9. Detection and Characterization of Bacterial Proteinases Using Zymography

Madathiparambil G. Madanan and Ambili Mechoor

10. A Sensitive, Rapid, and Specific Technique for the Detection of Collagenase Using Zymography

Shivcharan Prasad and Ipsita Roy

Part III: Reverse Zymography and In Situ Zymography

11. Reverse Zymography: Overview and Pitfalls

Kanika Sharma and Debasish Bhattacharyya

12. Cell In Situ Zymography: Imaging Enzyme-Substrate Interactions

Aastha Chhabra and Vibha Rani

Part IV: 2D Zymography

13. Examination of Gelatinase Isoforms in Rodent Models of Acute Neurodegenerative Diseases Using Two-Dimensional Zymography

Shanyan Chen, Fanjun Meng, Zhenzhou Chen, Zhe Qu, Jiankun Cui, and Zezong Gu

14. Two-Dimensional Zymography of Proteases from Steatotic Duck Liver

Jeff Wilkesman, Maria Fernanda Padron, Liliana Kurz, and Herve Remignon

Part V: Special Zymography Cases

15. Simultaneous Detection of Activity and Relative Molecular Mass of Adenylate Kinases after SDS-PAGE and Blotting

Silvia Ravera and Isabella Panfoli

16. Silver-Stained Fibrin Zymography: Separation of Proteases and Activity Detection Using a Single Substrate-Containing Gel

Chang-Su Park, Dae-Ook Kang, and Nack-Shick Choi

17. Zymography Methods to Simultaneously Analyze Superoxide Dismutase and Catalase Activities: Novel Application for Yeast Species Identification

Esther Gamero-Sandemetrio, Rocio Gomez-Pastor, and Emilia Matallana

18. Detection of Guaiacol Peroxidase on Electrophoretic Gels

Diana Castro, Lellys M. Contreras, Liliana Kurz, and Jeff Wilkesman

19. In Situ Demonstration and Characteristic Analysis of the Protease Using Substrate Immersing Zymography

He HaiLun, Li Hao, and Liu Dan

20. Use of Zymography in Trypanosomiasis Studies

Jessyka Fernanda Santiago Monte, Claudia Jassica Goncalves Moreno, Joana Patricia Molato Figueiredo Lopes Monteiro, Hugo Alexandre de Oliveira Rocha, Aline Rimoldi Ribeiro, and Marcelo Sousa Silva

21. Zymography in Multiwells for Quality Assessment of Proteinases

Ambili Mechoor and Madanan G. Madathiparambil

22. Visualization of Enzyme Activities in Earthworm Biopores by In Situ Soil Zymography

Bahar S. Razavi, Duyen Hoang, and Yakov Kuzyakov

23. Multiplex Cathepsin Zymography to Detect Amounts of Active Cathepsins K, L, S, and V

Manu O. Platt

24. Transfer Zymography

Daniel Pan, Karl A. Wilson, and Anna Tan-Wilson

25. Sequential Detection of Thermophilic Lipase and Protease by Zymography

Liliana Kurz, Zully Hernandez, Lellys M. Contreras, and Jeff Wilkesman

26. Calpain Zymography: General Methodology and Protocol

Kevin K.W. Wang

27. CTAB Zymography for the Analysis of Aspartic Proteases from Marine Sponges

Oscar Gonzalez and Jeff Wilkesman

28. Zymography Detection of a Bacterial Extracellular Thermoalkaline Esterase/Lipase Activity

Maria Tapizquent, Marleny Fernandez, Georgina Barreto, Zully Hernandez, L. Mariela Contreras, Liliana Kurz, and Jeff Wilkesman

29. Amylase Zymography

Adarelys J. Andrades Mundo and Lellys M. Contreras

Additional information

NLS9781493983872
9781493983872
1493983873
Zymography: Methods and Protocols by Jeff Wilkesman
New
Paperback
Humana Press Inc.
2018-06-12
310
N/A
Book picture is for illustrative purposes only, actual binding, cover or edition may vary.
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